Rosetta FARFAR2 Protocol



[Submit FARFAR2 task]
[FARFAR2 Queue]


[FARFAR2 Server Documentation]






Please cite the following article when referring to results from our ROSIE server:

  1. Watkins, A. M.; Rangan, R.; Das, R. “FARFAR2: Improved de novo Rosetta prediction of complex global RNA folds.” Structure, 2020, 28: 963-976.; doi: https://doi.org/10.1016/j.str.2020.05.011
  2. Watkins, A. M.; Das, R. "RNA 3D modeling with FARFAR2, online." bioRxiv 2020.11.26.399451; doi: https://doi.org/10.1101/2020.11.26.399451

  3. Lyskov S, Chou FC, Conchúir SÓ, Der BS, Drew K, Kuroda D, Xu J, Weitzner BD, Renfrew PD, Sripakdeevong P, Borgo B, Havranek JJ, Kuhlman B, Kortemme T, Bonneau R, Gray JJ, Das R., "Serverification of Molecular Modeling Applications: The Rosetta Online Server That Includes Everyone (ROSIE)". PLoS One. 2013 May 22;8(5):e63906. doi: 10.1371/journal.pone.0063906. Print 2013. Link

Modeling tools developed by the Das Lab at Stanford University. The Rosie implementation was developed by Andrew Watkins and Sergey Lyskov.



We welcome scientific and technical comments on our server. For support please contact us at Rosetta Forums with any comments, questions or concerns.