Submit a new mp_lipid_acc job

 Job short description (visible in queue):

Download PDB from PDBTM database: proteins in PDBTM are already transformed into membrane coordinates and have corrected oligomeric state - recommended

Download PDBID from OPM database: proteins in OPM are already transformed into membrane coordinates and have corrected oligomeric state; be aware that OPM also contains peripheral membrane proteins that aren't handled by the method

Upload custom PDB file - not recommended - Requires structure to be (1) an integral membrane protein, (2) transformed into membrane coordinates (TMDET or PPM), and (3) with correct oligomeric state!!!

 




 




Input PDB model 





Specify slice_width value

Rosetta mp:lipid_acc:slice_width value:

Specify dist_cutoff value

Rosetta mp:lipid_acc:dist_cutoff value:

Specify shell_radius value

Rosetta mp:lipid_acc:shell_radius value:

Job Description (for your own records):
Submit

You have not logged in! If you already have a ROSIE account, please login to submit your job. Alternatively, you also can submit a job as Guest:

Keep my job-data public (Note that Public Jobs have higher priority and longer life time!)

If you decide to keep your job private and submit it as Guest, your ROSIE Job will be allocated an obscure URL (anybody with a link will be able to access the results). For better security please consider to Create a ROSIE Account and use it to submit private jobs.

[optional] Notify me when my job completes by sending a mail to: